CDS

Accession Number TCMCG057C16062
gbkey CDS
Protein Id XP_018484108.1
Location join(6337023..6337188,6337297..6337382,6337496..6338085,6338175..6338428,6338520..6338602,6338705..6338776)
Gene LOC108854929
GeneID 108854929
Organism Raphanus sativus

Protein

Length 416aa
Molecule type protein
Topology linear
Data_file_division PLN
dblink BioProject:PRJNA344915
db_source XM_018628606.1
Definition PREDICTED: probable sodium/metabolite cotransporter BASS6, chloroplastic isoform X1 [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category P
Description bile acid sodium symporter family protein
KEGG_TC 2.A.28
KEGG_Module -
KEGG_Reaction -
KEGG_rclass -
BRITE ko00000        [VIEW IN KEGG]
KEGG_ko ko:K03453        [VIEW IN KEGG]
EC -
KEGG_Pathway -
GOs GO:0003674        [VIEW IN EMBL-EBI]
GO:0005215        [VIEW IN EMBL-EBI]
GO:0005342        [VIEW IN EMBL-EBI]
GO:0005575        [VIEW IN EMBL-EBI]
GO:0005622        [VIEW IN EMBL-EBI]
GO:0005623        [VIEW IN EMBL-EBI]
GO:0005737        [VIEW IN EMBL-EBI]
GO:0006810        [VIEW IN EMBL-EBI]
GO:0006811        [VIEW IN EMBL-EBI]
GO:0006820        [VIEW IN EMBL-EBI]
GO:0006855        [VIEW IN EMBL-EBI]
GO:0008028        [VIEW IN EMBL-EBI]
GO:0008150        [VIEW IN EMBL-EBI]
GO:0008509        [VIEW IN EMBL-EBI]
GO:0008514        [VIEW IN EMBL-EBI]
GO:0009507        [VIEW IN EMBL-EBI]
GO:0009526        [VIEW IN EMBL-EBI]
GO:0009536        [VIEW IN EMBL-EBI]
GO:0009941        [VIEW IN EMBL-EBI]
GO:0015075        [VIEW IN EMBL-EBI]
GO:0015238        [VIEW IN EMBL-EBI]
GO:0015318        [VIEW IN EMBL-EBI]
GO:0015665        [VIEW IN EMBL-EBI]
GO:0015711        [VIEW IN EMBL-EBI]
GO:0015718        [VIEW IN EMBL-EBI]
GO:0015849        [VIEW IN EMBL-EBI]
GO:0015850        [VIEW IN EMBL-EBI]
GO:0015893        [VIEW IN EMBL-EBI]
GO:0022857        [VIEW IN EMBL-EBI]
GO:0031967        [VIEW IN EMBL-EBI]
GO:0031975        [VIEW IN EMBL-EBI]
GO:0034220        [VIEW IN EMBL-EBI]
GO:0042221        [VIEW IN EMBL-EBI]
GO:0042493        [VIEW IN EMBL-EBI]
GO:0043226        [VIEW IN EMBL-EBI]
GO:0043227        [VIEW IN EMBL-EBI]
GO:0043229        [VIEW IN EMBL-EBI]
GO:0043231        [VIEW IN EMBL-EBI]
GO:0043879        [VIEW IN EMBL-EBI]
GO:0044422        [VIEW IN EMBL-EBI]
GO:0044424        [VIEW IN EMBL-EBI]
GO:0044434        [VIEW IN EMBL-EBI]
GO:0044435        [VIEW IN EMBL-EBI]
GO:0044444        [VIEW IN EMBL-EBI]
GO:0044446        [VIEW IN EMBL-EBI]
GO:0044464        [VIEW IN EMBL-EBI]
GO:0046942        [VIEW IN EMBL-EBI]
GO:0046943        [VIEW IN EMBL-EBI]
GO:0050896        [VIEW IN EMBL-EBI]
GO:0051179        [VIEW IN EMBL-EBI]
GO:0051234        [VIEW IN EMBL-EBI]
GO:0055085        [VIEW IN EMBL-EBI]
GO:0071702        [VIEW IN EMBL-EBI]
GO:0097339        [VIEW IN EMBL-EBI]
GO:0098656        [VIEW IN EMBL-EBI]
GO:1900866        [VIEW IN EMBL-EBI]
GO:1901618        [VIEW IN EMBL-EBI]
GO:1903825        [VIEW IN EMBL-EBI]
GO:1905039        [VIEW IN EMBL-EBI]

Sequence

CDS:  
ATGAATACGATCACAACTCCCAAAGAAACTCTACATCTTAAATCAAAACTTCGTCTTCTACCACCACGAGCTCTACATCGAAGTCAACGTGTTCAACTTCTCCCGCTCAACACCTTCTCCAACTCTTCTCTGATTTCTCCAGCTCGCATTGTCTCACTTTCTCAAGGTGGGAGATCGATAGACTTGTGGCGTAGATATGCATCCGACAAGTTCTCAGACATGGGTTTGGATCCTGGAGCTGGTTCAGACAAGATATTTAATGAGACGACGGCTTCTTCTTCTTCTTCTATAGTGGAAACATTAAAGAAAGCAAACTCAATCCTTCCTCATGTAGTCTTGGCGAGTACTCTCTTAGCTCTTCTCTACCCTCCTTCTTTCACTTGGTTCACCTCCAGGTACTTCGTACCTGCTTTAGGCTTCTTGATGTTTGCGGTTGGTATCAACTCAAACGAGAAAGACTTTCTCGAAGCTTTCAAAAGACCGAAAGCTATACTCCTCGGTTACCTTGGACAGTATCTCATCAAGCCTCTCCTTGGTTTCATCTTTGGCTTAGCTGCTGTCTCTCTTTTCCACCTCCCTACTCCTATAGGTGCTGGAATCATGTTGGTCTCGTGTGTTAGTGGAGCTCAGTTATCAAACTACGCCACTTTCTTGACTGATCCAGCATTGGCACCTCTTAGCATCGTCATGACTTCTCTATCTACCGCTACCGCGGTCCTTGTCACGCCGATGCTATCGCTCTTGCTTATAGGGAAGAAGCTGCCCGTTGATGTGAAAGGAATGATATCCAGCATTCTCCAGGTCGTGATCGCGCCTATTGCTGCAGGGTTGCTACTAAACAAGTTGTTCCCAAAACTATCCAATGCAATCAGACCGTTTCTCCCAGTTCTATCGGTTCTTGACACGGCATGCTGCGTTGGAGCGCCACTGGCGTTGAACATAAACTCGGTTGTGTCTCCGTTTGGAGCAACGATATTGTTGCTAGTAACGATGTTTCATCTCTCGGCTTTCCTCTCTGGATACTTCGTTACCGGTTCAGTCTTTAGAAACGCTCCAGACGCTAAAGCCTTGCAGAGAACATTGTCCTATGAAACTGGAATGCAGAGTAGTCTTTTGGCACTAGCGCTTGCGACAAAGTTCTTTCAAGATCCTCTTGTTGGGATCCCTCCTGCAATATCTACGGTGGTAATGTCATTGATGGGGTTCACACTCGTTATGATATGGTCTAACGAAAAAGAGCAAAGAATTTAA
Protein:  
MNTITTPKETLHLKSKLRLLPPRALHRSQRVQLLPLNTFSNSSLISPARIVSLSQGGRSIDLWRRYASDKFSDMGLDPGAGSDKIFNETTASSSSSIVETLKKANSILPHVVLASTLLALLYPPSFTWFTSRYFVPALGFLMFAVGINSNEKDFLEAFKRPKAILLGYLGQYLIKPLLGFIFGLAAVSLFHLPTPIGAGIMLVSCVSGAQLSNYATFLTDPALAPLSIVMTSLSTATAVLVTPMLSLLLIGKKLPVDVKGMISSILQVVIAPIAAGLLLNKLFPKLSNAIRPFLPVLSVLDTACCVGAPLALNINSVVSPFGATILLLVTMFHLSAFLSGYFVTGSVFRNAPDAKALQRTLSYETGMQSSLLALALATKFFQDPLVGIPPAISTVVMSLMGFTLVMIWSNEKEQRI